BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D03SP1|AL429558
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1390 1681 0.0
>3x_Contig1390
Length = 7609
Score = 1681 bits (844), Expect = 0.0
Identities = 854/861 (99%)
Strand = Plus / Plus
Query: 39 agagcatattaaagttattataggagamacaacatgtcaggwaaagtacacggtggaaag 98
||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 86 agagcatattanagttattataggagaaacaacatgtcaggaaaagtacacggtggaaag 145
Query: 99 ggtaagtcgggagccaaagacagtggttcattgaaatcacaatcacattctgctagagct 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ggtaagtcgggagccaaagacagtggttcattgaaatcacaatcacattctgctagagct 205
Query: 159 ggtcttcagtttccggttgggagagtgaagctttatttgaagagaaatgctgctggaaga 218
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 206 ggtcttcagtttccggttgggagagtgaagcgttatttgaagagaaatgctgctggaaga 265
Query: 219 acccgtgttgggtccaaggctgctatttacttgactgctgttcttgagtatttgactgct 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acccgtgttgggtccaaggctgctatttacttgactgctgttcttgagtatttgactgct 325
Query: 279 gaagttttggaattggctggtaacgctgctaaagatttgaaggtgaagagaattacccca 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaagttttggaattggctggtaacgctgctaaagatttgaaggtgaagagaattacccca 385
Query: 339 agacatttacaacttgctatcagaggtgatgatgaattagactccttgatcagagccact 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agacatttacaacttgctatcagaggtgatgatgaattagactccttgatcagagccact 445
Query: 399 atcgcttctggtggtgttctacctcatatcaacaaggctttgttgttgaaagtggaaaas 458
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 atcgcttctggtggtgttctacctcatatcaacaaggctttgttgttgaaagtggaaaag 505
Query: 459 aagcataaatsaagcgtgaaaattgtatcaatttgaatgaagtttaatgagactaagcgc 518
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aagcataaatgaagcgtgaaaattgtatcaatttgaatgaagtttaatgagactaagcgc 565
Query: 519 ttaamaacagctctctattgttatttcattattatatttcttctactttttgactctaac 578
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttaaaaacagctctctattgttatttcattattatatttcttctactttttgactctaac 625
Query: 579 tgtaatcatatcccagggtgaagggttgtatattttcatctccacttcccccccctctct 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgtaatcatatcccagggtgaagggttgtatattttcatctccacttcccccccctctct 685
Query: 639 tttcccttgtcgtgatggtacactactaattcaccgcattatcttatctcaaaatatcaa 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tttcccttgtcgtgatggtacactactaattcaccgcattatcttatctcaaaatatcaa 745
Query: 699 aagtgcaatttaaccctcatctattccatttccatatttttattaaacagttatgtatat 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 aagtgcaatttaaccctcatctattccatttccatatttttattaaacagttatgtatat 805
Query: 759 gtaacatctataatccaattcctacttttactcatgacctgttaatattagagcttgtgt 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gtaacatctataatccaattcctacttttactcatgacctgttaatattagagcttgtgt 865
Query: 819 ttacgtctatactcaaatacttattcattccagaataggactatatacaagtttgttccg 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 ttacgtctatactcaaatacttattcattccagaataggactatatacaagtttgttccg 925
Query: 879 ttagaatatcggtggtccaat 899
|||||||||||||||||||||
Sbjct: 926 ttagaatatcggtggtccaat 946
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7787
Number of Sequences: 1807
Number of extensions: 7787
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)